BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037C01LP1|AL430355
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1566 1215 0.0
3x_Contig1490 363 e-100
>3x_Contig1566
Length = 10355
Score = 1215 bits (613), Expect = 0.0
Identities = 679/701 (96%)
Strand = Plus / Plus
Query: 230 ttttacccgatttggcttcgtttggtacttttttttttagcagccaatgcaagtttgaac 289
|||||||| |||| ||||| ||| ||||||||||||| || ||||| || ||| |||
Sbjct: 7 ttttaccctattttgcttctttttttactttttttttttgcttccaattcattttttaac 66
Query: 290 tggaaaaagaccgttcaaagagtcacaagataatacagggacaaaatattcaacaaagga 349
| ||||| ||| |||||||| |||||| |||||||| ||||||||||||||||| ||
Sbjct: 67 tttaaaaatacctttcaaagattcacaatataatacatttacaaaatattcaacaaatga 126
Query: 350 gcattctgaacttttgaaagatagttttatttcaaaacttgcctccacacaattgcaaaa 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gcattctgaacttttgaaagatagttttatttcaaaacttgcctccacacaattgcaaaa 186
Query: 410 cattattatatccctgttttttattatatccagttttcatatttttgttttgaactcgta 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cattattatatccctgttttttattatatccagttttcatatttttgttttgaactcgta 246
Query: 470 cacatatcaaacagtgaaaactgcactcaaaatataataaccgatcaattataaattgat 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cacatatcaaacagtgaaaactgcactcaaaatataataaccgatcaattataaattgat 306
Query: 530 ttaagctgcaatacctttctccctcattgtgttctccttcctatctttacacaatatctt 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttaagctgcaatacctttctccctcattgtgttctccttcctatctttacacaatatctt 366
Query: 590 tattatcttgtgttttattagctgttctgattctccttccttctccttcaatcaaatatt 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tattatcttgtgttttattagctgttctgattctccttccttctccttcaatcaaatatt 426
Query: 650 aatattgaggagaggaaacgaacccataatccaatagatcaccgacataaggcaaaagta 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aatattgaggagaggaaacgaacccataatccaatagatcaccgacataaggcaaaagta 486
Query: 710 cactcgcacgttacaagactgttgaccataccgtacgaataaaggagcacattgttttat 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cactcgcacgttacaagactgttgaccataccgtacgaataaaggagcacattgttttat 546
Query: 770 tccattacaaattccgagattatatcgcctagaaataaaagtagggggctatctggacat 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tccattacaaattccgagattatatcgcctagaaataaaagtagggggctatctggacat 606
Query: 830 atttatactatttgtccacttgttttttccctctcttggccaggtcactttgccgcagta 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 atttatactatttgtccacttgttttttccctctcttggccaggtcactttgccgcagta 666
Query: 890 cttgaaaattaagacaaatttttttttgagaaataaaaccg 930
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 cttgaaaattaagacaaatttttttttgagaaataaaaccg 707
>3x_Contig1490
Length = 9411
Score = 363 bits (183), Expect = e-100
Identities = 186/187 (99%)
Strand = Plus / Plus
Query: 1 gatctgagattagctcctcgcaatcaagaattctgtttttactttgatttcttctttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9225 gatctgagattagctcctcgcaatcaagaattctgtttttactttgatttcttctttctt 9284
Query: 61 ttggagtacaagaacgcataatttgggttatttcatatagctagtcgaatttgtcatctg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9285 ttggagtacaagaacgcataattcgggttatttcatatagctagtcgaatttgtcatctg 9344
Query: 121 aagcattggccgatttcatcatctgatattctttctacgacgactctattagtttcgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9345 aagcattggccgatttcatcatctgatattctttctacgacgactctattagtttcgctg 9404
Query: 181 aaatcct 187
|||||||
Sbjct: 9405 aaatcct 9411
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,920
Number of Sequences: 1807
Number of extensions: 10920
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)